PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT32442

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 322aa MW: 35001.2 Da PI: 6.5038

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT32442	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.2	8.7e-39	30	89	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++ lkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk+k+s OIT32442 30 NQQVLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRS 89 68899****************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MQDIHPIGGG GGRFFGGGGD RRLRPNHHQN QQVLKCPRCD SPNTKFCYYN NYNLSQPRHF 60 CKSCRRYWTK GGVLRNVPVG GGCRKSKRSK PKPAPPSDAA AEAADDASVE HKSNSNSSSE 120 SSSLTATTTA AAAANTSGSA TAEVVSAASS HSASTFLNFH ESNFFLPNST NASFDHQPLM 180 DHSAEGQIFQ DIGNFTNLMT SSNDPSVVGF NMMEIPAYRL PENQNSNEQW NQPSKMVGTD 240 QPVNDLKMEQ MDTGFMNQTG RVEFGLQQNR VNSSEIAPLD WQTGGGGGDG EHGLYDLTGT 300 VDHSYWSQTQ WGGNDHSLNF LP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	19	GGGGRFFGGGG
2	10	20	GGGGRFFGGGG
3	11	21	GGGGRFFGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	1e-32	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT32442