PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32230
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 321aa    MW: 35745.4 Da    PI: 6.2461
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32230genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof116.88.5e-371369561
    zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
              a +cprC s ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rk+++ 
  OIT32230 13 APTCPRCGSINTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRG 69
              568**************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MERGIWKTNV EMAPTCPRCG SINTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG  60
GGCRKSRRGK SSSSSIRSSS TDHHHGLISR NLGRGINGLN NPSNNIDQST TSLAQVGDHH  120
GPSIDLALVY ANFLNDSSKP QPEVHHQHLE LPELLPNDHH QEVIVGPSFV FSDMLNMEFA  180
SDLGQETQLS DGDGVYFSGI DEKQQTMQHV MNHNDDVHYT NMNMNANIIN NELGNYMQLP  240
PLPCEELGVS SEGMAWSNSH DDHHMVFTND ILINTSHTST GGLEPESEPE ILAAQDPSHH  300
HANANDRSLF SLSNFGNIFR P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.11e-33Dof family protein