PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31902
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 253aa    MW: 29058.8 Da    PI: 9.5178
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31902genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.28.2e-50141381128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
               lppGfrF+Ptdeelvv+yLk+kv + +l++ ++i+ev+i+k++PwdLp      e+e yfFs+r+ ky++g+r+nrat+sgyWkatg dk+++s  +++lv
  OIT31902  14 LPPGFRFRPTDEELVVQYLKRKVLSFPLPA-SIIPEVEIHKSDPWDLPGD---LEEERYFFSTREVKYPNGNRSNRATNSGYWKATGIDKQIVSCkGQQLV 110
               79****************************.89***************54...46799**********************************99746777* PP

       NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
               glkktLvfy+g++p+g +t+W+mheyrl
  OIT31902 111 GLKKTLVFYRGKSPHGCRTNWIMHEYRL 138
               **************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEKLNFVKNG ILRLPPGFRF RPTDEELVVQ YLKRKVLSFP LPASIIPEVE IHKSDPWDLP  60
GDLEEERYFF STREVKYPNG NRSNRATNSG YWKATGIDKQ IVSCKGQQLV GLKKTLVFYR  120
GKSPHGCRTN WIMHEYRLPN LETISILPNN NLTQENWVLC RIFLKRKDGK NKEEDITHQV  180
FNSRNTSANS GNKKKAVFYD FMAREREDLN GSVPASTSFS GSSGITELTA NESDDHEESS  240
SSFNSFTRRK QCP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-93NAC family protein