PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31790
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family FAR1
Protein Properties Length: 329aa    MW: 37656.5 Da    PI: 6.8386
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31790genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR191.89.2e-29165252291
      FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
               fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  OIT31790 165 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLSP 252
               ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MRQTGAVTNI STLKNIKTEI FVLSLGPFQD LIHRVVSIVQ TANHNLYSNV DILQCGVFTL  60
CFKFFYVYKQ ITDAIDATVD FVVDDHIIGE EEEGTVVEVR AVDENAVRGS SSEEALHDVH  120
DVKVDEDLSD REVVPLEESQ SLGNSISDEP YVGQEFESEA AAHAFYNAYA TRVGFIIRVS  180
KLSRSRRDGS AIGRALVCNK EGFRMPDKRE KIVRQRAETR VGCRAMILVR KVSSGKWVVT  240
KFVKEHTHPL SPGKGRRDLI YDQYPNEHDK IRELSQQLAA EKKRSATYKR HLEMIFEHIE  300
EHNQSLSKKI QDIVHNVREM ESRDQHHHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-96FAR1 family protein