PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30682
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 326aa    MW: 36756.4 Da    PI: 5.1145
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30682genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.61.5e-24117178159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               +dDg++WrKYGqK++ +s++pr+Y+rCt++   +C+++k+v++ +++p ++ +tY g+H+++
  OIT30682 117 VDDGHAWRKYGQKQILNSTYPRHYFRCTHKydqKCQATKQVQKIQDNPPLFRTTYYGNHTCK 178
               59***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MESPLPEKSS ADLKRAIDGL IRGQEFTRRL KEIIKKPLGG EVATTMAEDL VGKIMNSFSE  60
TLSVIISGES DDDTAEVKSP EDSSGSCKST TSFNDRRGCY KRRKTSETNT KESSDLVDDG  120
HAWRKYGQKQ ILNSTYPRHY FRCTHKYDQK CQATKQVQKI QDNPPLFRTT YYGNHTCKPF  180
PGVSQIILDT HIDGDSSILL SFDRNNNNNN NYSSVQNVNH NYQPYNIPTF PSIKQETKEE  240
VFQRSCTSYQ KIEDQNQSSN SDYFLLANDD HLSTPAAFEA SGGHMAAALL PDVISSGVYS  300
SCTSTDNLEI DFDFEESLWN FEGYNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-43WRKY family protein