PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30260
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 375aa    MW: 41142.5 Da    PI: 3.947
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30260genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.82e-16136183956
       AP2   9 dkkrgrWvAeIrd.pse.ngkrkrfslgkfgtaeeAakaaiaarkklege 56 
                +++g+WvAeIr+ +++ ng  kr +lg+f ta eAa a+++a+k l+g+
  OIT30260 136 QRTWGKWVAEIREpVYNsNG--KRLWLGTFSTAVEAAIAYDEAAKVLYGH 183
               456**********7777665..***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MRCISRGKSF LVENPFAVEA AIAYDEAAKV LYGHNAILNF PDYCVQNSEL ANYSTSVSIA  60
RTTSLGSSES SIEDSRIEPD LQTSDTPDDG VVAITDEKTI LDDPTNLCSD GRADGDPGAQ  120
QDSSVCCLNM ESVVMQRTWG KWVAEIREPV YNSNGKRLWL GTFSTAVEAA IAYDEAAKVL  180
YGHNAILNFP DYCVQNSELA NYSTSVSIAR TTSLGSSESS VEDSRIEPDL QTSDTPDDGA  240
QQDSSVCCLN MESIVMEVDD SLDDMKGLNC STRIDSKPIL EPTSSCVKVE APSDNDFVQD  300
RCLECVDDAN KVSNSMHILH HEITDVKPND NIFQHHDVLR PNMSYESDDQ VLLPCDPIAL  360
PDYISELLII FTPEM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.19e-14ERF family protein