PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT30124 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | C2H2 | ||||||||
Protein Properties | Length: 371aa MW: 42273 Da PI: 6.7586 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.3 | 0.00052 | 79 | 101 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H OIT30124 79 CSydGCGKTFIDAGALRKHSHIH 101 78889**************7766 PP | |||||||
2 | zf-C2H2 | 16.5 | 2.4e-05 | 106 | 130 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H OIT30124 106 YVCHyeGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP | |||||||
3 | zf-C2H2 | 22.4 | 3.2e-07 | 136 | 160 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+Cp Cgk Fs nL++H++tH OIT30124 136 YVCPheGCGKAFSLDFNLRSHMKTH 160 99**********************9 PP | |||||||
4 | zf-C2H2 | 16.3 | 2.8e-05 | 166 | 191 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 + Cp Cgk++ + + Lk+Hi + H OIT30124 166 HICPypECGKRYAHEYKLKNHIASsH 191 679999****************9988 PP | |||||||
5 | zf-C2H2 | 16.1 | 3.1e-05 | 229 | 254 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+Cp C+ks+ + + L+ H+r+ H OIT30124 229 YSCPyeGCDKSYIHEYKLNLHLRNmH 254 99*********************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
METHMAHHLF ERRPIYKSKA PAAKWFKEWV PQDVVATGGK CYLLKWVNEA TLKALKEKPK 60 EPEVPVPEPE PTTEVLFLCS YDGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERDYVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PECGKRYAHE 180 YKLKNHIASS HQKNSTPDAP KYTPPVEKPM KTPKSSSAAY ASSSSDRPYS CPYEGCDKSY 240 IHEYKLNLHL RNMHPGHFPE DNAKNAQSTA DNEMDEGSDQ DAYAAKRGNG KIQKQSRPKP 300 SLKQPPIKVA RKSSSASPAN ISIAAKKPWP VKEENYNEED SEETEEERDD VGDGWRYGEN 360 DDDDEETEED E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 1e-139 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT30124 |