PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28392
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 325aa    MW: 37262.9 Da    PI: 6.9826
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28392genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM183.16.8e-57161411128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
               lppGfrFhPtdeel+++yL++kv + ++++ ++i evd++kvePwdLp k+k +ekewyfF+ rdkky+tg+r+nrat++gyWkatgkdke+++ +++lvg
  OIT28392  16 LPPGFRFHPTDEELITHYLAPKVLDCNFSA-KAIGEVDLNKVEPWDLPWKAKMGEKEWYFFCIRDKKYPTGQRTNRATEAGYWKATGKDKEIFR-SKTLVG 114
               79**************************99.88***************888999****************************************.999*** PP

       NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
               +kktLvfykgrap+gekt+Wvmheyrl
  OIT28392 115 MKKTLVFYKGRAPRGEKTNWVMHEYRL 141
               *************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
METVCGFEGH EEEMELPPGF RFHPTDEELI THYLAPKVLD CNFSAKAIGE VDLNKVEPWD  60
LPWKAKMGEK EWYFFCIRDK KYPTGQRTNR ATEAGYWKAT GKDKEIFRSK TLVGMKKTLV  120
FYKGRAPRGE KTNWVMHEYR LDGKYSVHNL PKSAQNECVI CRVFKKTSGG KKIAISSLIR  180
NNNMTESPRS SNLPPLMDMS PYNNQITTTT RSSGETSNSH VTCFSDSMED QKPQTQQPLA  240
CSPPSVDFPK YPSNIPNQVM QPYIDNFQYV DSGLMQDNSI LRLLLENNNY GSESKHNNHL  300
RGYEDHNDFN INSAGPVDLD CLWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-125NAC family protein