PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28353
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 329aa    MW: 35972.6 Da    PI: 7.7525
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28353genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.85.7e-341165155
   G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
              k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  OIT28353 11 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 65
              79****************************************************8 PP
2Myb_DNA-binding63.54.3e-201364148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT e++e++vdav+qlGg+   t+k + r mg +g+t +++ks++qky+
         OIT28353 13 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 64
                     89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MEPINPSLAG KQRLRWTHEL HERFVDAVAQ LGGPDRATPK GVLRVMGVQG LTIYHVKSHL  60
QKYRLAKYLP DSSSDGKTSD KKESGDMLSS LDGSSAGVQI NDTYNLLHFH FISYISLISR  120
KLWNLDFIPA KGLGILKVTC HRLLLLSFLL LQVQRQLQLR IEAQGKYLKK IIEEQQRLSG  180
VLSEVPVSGV TPSPAGENGP ESDNRTDPGT PAPTSESPLI DKPIQEHAPT KSVSIDQSFS  240
SQNEPLTPDS GCYETSPINS PKGESSSKKQ RVGAFTKADT LLPHQILESS LSSQYQQPNP  300
VDFLASDQFN LSSGLTLGNE GSKISGSNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-67G2-like family protein