PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT28319 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | HSF | ||||||||
Protein Properties | Length: 105aa MW: 12188.1 Da PI: 4.7631 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 78.6 | 9.9e-25 | 28 | 86 | 2 | 60 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl k+y ++ed+++++++sw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+Y OIT28319 28 FLLKTYMLVEDPATDDVVSWNSDGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTY 86 9*********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence |
MMVVVEEVQS DEKSLLLEYV RKSSPSPFLL KTYMLVEDPA TDDVVSWNSD GTAFVVWQPA 60 EFARDLLPTL FKHSNFSSFV RQLNTYVCYP SIYCLKLFIR IECLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41690.1 | 3e-35 | HSF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT28319 |