PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT27447

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 302aa MW: 32118.5 Da PI: 8.9242

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT27447	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.8	1.2e-38	61	119	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++++cprCds ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ OIT27447 61 SENIRCPRCDSPNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNT 119 57899***************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MIQELFAGNT TLIGGGGGGG GENISKQSNN PSSSPLSSTS NSSTLTTNIP AAANASSSSN 60 SENIRCPRCD SPNTKFCYYN NYNLTQPRHF CKTCRRYWTK GGALRNVPIG GGCRKNKNTN 120 ISTTSAAKSS AAKLKASLPT FLGGLEYEIS NSNPFLSSSP QNQYPLISIF RGNHQNLGFN 180 ADTCHLPSSV VVKEEGKSIG VNSYNQLPNS LGLCSNLWKN NQQSGSIIGQ VQSSGLQELY 240 QRLKASTSRC YPDHAPSLLG NTTSSSSMIL ESAPVGAGGE LDFWNPSIST WSDLQTANGA 300 YF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	9e-33	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT27447