PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT27323 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 24416.7 Da PI: 6.283 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.9 | 2.1e-17 | 58 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+e+r+p +k+ r++lg+f ae+Aa+a++ a+ +l+g OIT27323 58 PVYRGVRKRN-SGKWVCEVREP---NKKSRIWLGTFPCAEMAARAHDVAAIALRG 108 68*****888.8******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MDIFRSYYSD PLAEYSSISD TRRSSCMRAN LSDEEVMLAS NNPKKRAGRK KFRETRHPVY 60 RGVRKRNSGK WVCEVREPNK KSRIWLGTFP CAEMAARAHD VAAIALRGRS ACLNFADSAW 120 RLPIPASSDA KDIQKAAAEA AEAFRSSEAE NMPEYSGENS KETPENMFYM DEEALFCMPG 180 LLANMAEGLM LPPPQCSQIG DHMELADVDM PLWSYSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 1e-73 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT27323 |