PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT27097

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 333aa MW: 36256.4 Da PI: 6.5182

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT27097	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.9	5.5e-34	48	102	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl OIT27097 48 KQRLRWTNELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 102 79****************************************************8 PP
2	Myb_DNA-binding	63.3	4.9e-20	50	101	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ OIT27097 50 RLRWTNELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 101 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MYQPKGVPGS SLAHNNAAVH SQSLDCDDGS MDPTSGGNNI NNPSLASKQR LRWTNELHER 60 FVDAVAQLGG PDRATPKGVL RVMGVQGLTI YHVKSHLQKY RLAKYLPDSS SDGKKPDKKE 120 SRDMLSSLDG SSGVEITTAL KLQMEVQKRL HEQLEVQKQL QLRIEAQGKY LKKIIEEQQR 180 LSGVLSEVPG SGVVAPPTGD NGPESDNRSD PGTPAPTSES PNVEKHVKAH APTKSLSVDE 240 SFSLQHEPLT PDSDCPESSP MESPNGERSS KKQRVGISAA FAKDNEALTH QILESSLSSP 300 YQQPPSVFMT RDQFNRTSEL SLGIEDQKVS GNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-109	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT27097