PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT27011
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 336aa    MW: 36083.1 Da    PI: 7.4047
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT27011genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.42.8e-1298142347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
         OIT27011  98 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKY 142
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MTRRCSHCST NGHNSRTCPN RGVKLFGVRL TDGLIRKSAS MGNLTHFASS SGPLNGAVHD  60
SPGDTPDHPA VGGSADGYAS EDFVAGSSSS RERKKGVPWT EEEHRMFLLG LQKLGKGDWR  120
GIARNYVISR TPTQVASHAQ KYFIRQSNMS RRKRRSSLFD IVADESGDTP MVSRDFLADD  180
PPQGEMQSNN PLPPTPSVDE ECESMGSAAS ANSNDGELSI LKPESSQYPH PLVYPAYVAP  240
FFPMPYPCWP GYTAEAAKAE THEVLKPTAV HSKSPINVDE LVGMSKLSLG ESIGDAKPSS  300
LSLKLVEGSS RQSAFHANPS SGSSGMNSSH SPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-130MYB_related family protein