PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT26857
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family SRS
Protein Properties Length: 328aa    MW: 35670.2 Da    PI: 7.0521
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT26857genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702202.99e-631072453154
    DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelets 103
                g++sCqdCGnqakkdC+h+RCRtCCksrgf+C+thv+stWvpaakrre+qqq++          +++++kr +++   + s+l +t+l+s+++   le+ 
  OIT26857 107 GGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVRSTWVPAAKRREKQQQQEH---------RDNNPKRLKDD--PSGSSLVCTRLPSNTA--GLEVG 194
               5789*********************************************9988765.........35566677765..778999*****99975..58999 PP

    DUF702 104 slPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
               ++P++v+s+avf++vr+ss+++ e+++aYqtav+igGh+fkGiLydqGle+
  OIT26857 195 NYPSKVNSTAVFHRVRMSSIEETEDQIAYQTAVNIGGHIFKGILYDQGLES 245
               9***********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MAGFFSLGGG GRETSQEQHH QETSNHHNPE NNWFLYRNHD QELPAYKGFE LWQQQQDEQQ  60
NYQIRNPIIN PLQDLYPTSA IGLGVGPTAT DHGASRSAAF VMMSSSGGGI SCQDCGNQAK  120
KDCQHMRCRT CCKSRGFQCQ THVRSTWVPA AKRREKQQQQ EHRDNNPKRL KDDPSGSSLV  180
CTRLPSNTAG LEVGNYPSKV NSTAVFHRVR MSSIEETEDQ IAYQTAVNIG GHIFKGILYD  240
QGLESQYNNM NATTGDSSTG GTEPVVPHQH NLIGTATSAA TSNAAASGGG AAAAAEGSHF  300
LEHSLYSAPL INSFMAAGTQ FFPPPARS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.11e-61SRS family protein