PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT26800

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 369aa MW: 39579.3 Da PI: 7.0453

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT26800	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.7	5.3e-33	44	97	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt++LH++Fv+ave+LGG+++AtPk +l+lm+vkgLt++hvkSHLQ+YR+ OIT26800 44 PRLRWTQDLHRSFVHAVERLGGEDRATPKMVLQLMDVKGLTISHVKSHLQMYRS 97 8****************************************************7 PP
2	Myb_DNA-binding	48.4	2.2e-15	45	96	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg+ t+k + + m kg+t ++ks++q+y+ OIT26800 45 RLRWTQDLHRSFVHAVERLGGEdraTPKMVLQLMDvKGLTISHVKSHLQMYR 96 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MMKQPLELSE CSSQSSPSLS IENNLKDHSN KSGGVRPYVR SKMPRLRWTQ DLHRSFVHAV 60 ERLGGEDRAT PKMVLQLMDV KGLTISHVKS HLQMYRSMKH EQMIQAEAEA ANGSKRNRRD 120 GPEQMNYHHY YYGKALFDAH SSSTVTCSNY ADQLASTPTI LPPSWKHMQE TMENKIMELD 180 GKSNRCTMFR DFFNGHNVQD IGDGNKVVGE GSSLSNKSPS AEDEDFSSST ISKMATKILV 240 IVLMITSILA YPTNARSLAM EAKAAADEQK EYFRHPLPPL FGGFGGLRGG IRPPFGLGAG 300 VGGFGGGFGP FIGGGGTSTI GAGTGLGSSI GGGFNIGDNG GNNPDANAEL GAGHDLSEGG 360 DAAIGHDQP

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MMKQPLELSE CSSQSSPSLS IENNLKDHSN KSGGVRPYVR SKMPRLRWTQ DLHRSFVHAV  60
ERLGGEDRAT PKMVLQLMDV KGLTISHVKS HLQMYRSMKH EQMIQAEAEA ANGSKRNRRD  120
GPEQMNYHHY YYGKALFDAH SSSTVTCSNY ADQLASTPTI LPPSWKHMQE TMENKIMELD  180
GKSNRCTMFR DFFNGHNVQD IGDGNKVVGE GSSLSNKSPS AEDEDFSSST ISKMATKILV  240
IVLMITSILA YPTNARSLAM EAKAAADEQK EYFRHPLPPL FGGFGGLRGG IRPPFGLGAG  300
VGGFGGGFGP FIGGGGTSTI GAGTGLGSSI GGGFNIGDNG GNNPDANAEL GAGHDLSEGG  360
DAAIGHDQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	2e-33	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT26800