PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT26375 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 248aa MW: 27769.9 Da PI: 5.1849 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.2 | 2e-18 | 142 | 192 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrdp +ng +r++lg++ tae+Aa a+++a+ +++g OIT26375 142 HYRGVRVRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAAFAYDKAAFRMRG 192 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 248 aa Download sequence |
MYGIEEYEND YALLESIKCH LLDDWDTTPV TSSDNSTTSI YSRNNSIESN MFPNCLPNEF 60 DNTADTFLHD ILNEGIGYGF EPASDPTILN IKLEPEISVQ SPEVWNFTNF TEFVAPPETA 120 AEMKVEPPVW TRTATAPPKA KHYRGVRVRP WGKFAAEIRD PAKNGARVWL GTYETAEDAA 180 FAYDKAAFRM RGSRALLNFP LRINSGEPDP IRVGSKRLST SPEHSSSSPK KRKQNGSGRY 240 TQLGANQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G17500.1 | 1e-49 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT26375 |