PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT24244 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | HB-other | ||||||||
Protein Properties | Length: 168aa MW: 19915.4 Da PI: 4.8449 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 52.9 | 6.2e-17 | 9 | 53 | 8 | 52 |
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 ++eq++ Lee+F + ++p + +e+L+++lgL+++qVk+WF N+R OIT24244 9 SDEQIQKLEEVFSQMPTPENDVIEKLSEELGLDTDQVKIWFDNKR 53 689*****************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MDSPIGSSSD EQIQKLEEVF SQMPTPENDV IEKLSEELGL DTDQVKIWFD NKRCYIQAQS 60 DKEERENLRL ENSRLLLENL QMNLELRNHL CATCNPEKHR KILQDLQNEN AILQAELTII 120 SNMHDHLKEN PERYLLLKHH LRHYYNPSGL DLDLKVECDH NFPRLNWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46880.1 | 7e-10 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT24244 |