PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT22460 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 169aa MW: 19304.9 Da PI: 5.8027 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.3 | 2.1e-19 | 35 | 86 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y GVr ++ +g+++AeIrd + ng +r++lg+f+taeeAa +++a+ +++g+ OIT22460 35 HYIGVRKRP-WGKFAAEIRDSTRNG--RRVWLGTFDTAEEAAMTYDQAAFCMRGP 86 799******.**********44465..**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MDLKIQDHEK LISIKVEVES LSLEIDDSIS KEEKHYIGVR KRPWGKFAAE IRDSTRNGRR 60 VWLGTFDTAE EAAMTYDQAA FCMRGPSTCM NFPVEKVRES LQKMECNNLK DGLLSPAAAL 120 KEKHKKRSSS SSRKKQVNII KEEENVFIFE DLGPDLLDEL LSEYSSCSN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 135 | KHKKRSSSSSRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31230.1 | 2e-40 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT22460 |