PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT22395
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 282aa    MW: 31186.7 Da    PI: 6.4172
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT22395genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.5e-142570148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+++ +E++l ++++  lG++ W++Ia+ ++ gRt++++k+ w+++l
         OIT22395 25 RGPFSLDEQKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 70
                     89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MTGLLRCGKS CRLRWTNYLR PDIKRGPFSL DEQKLVIQLH GILGNRWAAI ASQLPGRTDN  60
EIKNLWNTHL KKHLLSMGID PDTHEPSSAS NGLLRRPPTS TSARHMAQWE SARLEAEARL  120
SRESQLLVPS SIDRSDTTDH FLRMWNSEIG ETFRKFKNRE KTDSQSPASQ ASSCTKYGSA  180
SGITTEVELG GVAGSPVTGS NQNEYAGWKN DQPHTEDILQ GSETSSCNAL EDSSESALQL  240
LLDFPTNNDL SFLGHSDSCS MYPFSSESSL ICPKAEHAVC FL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.14e-91MYB family protein