PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT22032

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Protein Properties

Length: 703aa MW: 78932.6 Da PI: 5.3958

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT22032	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	65.1	1.1e-20	571	667	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 +kvl++sdv+++gr+vlpkk ae+h +++++ ++ + +ed ++r+W++k+++ ++ks++y+l+ ++ +Fv+ ngL+egDf+v++ d ++++++++ OIT22032 571 QKVLKQSDVGNLGRIVLPKKEAESHlpELESRDGISIAMEDiGTSRVWNMKYRFwpNNKSRMYLLE-NTGDFVRTNGLQEGDFIVLYADT-KCGKYLIR 667 79***********************999999****7778***99777777777777.******************544.88887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MKRGLEYHGK QDLEDGLENV MVAMDDIQSH QQTTEFVPME EEQVLGSIVG DTEIFLDGDG 60 SHSHHHHLDV NNTSIFSTDF LPLPDFPCMS SSSSTCSAPT ALSKPFPTSS SSSSTSSSNS 120 ASWAILKSDA EEDVHKNIQP PALSSTTSME LSLLPPEDDV DCLNVMEDLG YMDLIDGNEF 180 WDPCTLFQSD NQNPQDYNMS DQSFQLSQDH QQNQESKPQQ IEEEGDDDQN DGLSFFTGNS 240 ELAVIFFEWL KQNKDYISAE DMRSIKLKRS TIESASKRLG GTKEGKKQLL RLILEWVEQY 300 QLQKKAAASD SPCQYQESQL HDSNPNPNSS FQYNNAVASD PNACFYPSPW MPTPSPYIPG 360 PDPFYPTPMA PGYTGDSYSN VPSFTNMEYQ TMESAQSWPP SQFSAMAASQ YNPFPENESN 420 LATQANPQGL FSQYSYQLYD GNGERLAKLG SSATKEARKK RMARQRRLPS HHYRHHSHQT 480 QHQSQSSDQS LRIVGENCTM SPANNPGNWV YWPSAASSPM IMVPPPEAPQ PHPMTERPGM 540 QPQNHQKHAS ADKRSQSQNW KTEKNLKFLL QKVLKQSDVG NLGRIVLPKK EAESHLPELE 600 SRDGISIAME DIGTSRVWNM KYRFWPNNKS RMYLLENTGD FVRTNGLQEG DFIVLYADTK 660 CGKYLIRGVK VRQTGPKAEG KKPAKKNVRN SSSAIALMKQ LVK

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MKRGLEYHGK QDLEDGLENV MVAMDDIQSH QQTTEFVPME EEQVLGSIVG DTEIFLDGDG  60
SHSHHHHLDV NNTSIFSTDF LPLPDFPCMS SSSSTCSAPT ALSKPFPTSS SSSSTSSSNS  120
ASWAILKSDA EEDVHKNIQP PALSSTTSME LSLLPPEDDV DCLNVMEDLG YMDLIDGNEF  180
WDPCTLFQSD NQNPQDYNMS DQSFQLSQDH QQNQESKPQQ IEEEGDDDQN DGLSFFTGNS  240
ELAVIFFEWL KQNKDYISAE DMRSIKLKRS TIESASKRLG GTKEGKKQLL RLILEWVEQY  300
QLQKKAAASD SPCQYQESQL HDSNPNPNSS FQYNNAVASD PNACFYPSPW MPTPSPYIPG  360
PDPFYPTPMA PGYTGDSYSN VPSFTNMEYQ TMESAQSWPP SQFSAMAASQ YNPFPENESN  420
LATQANPQGL FSQYSYQLYD GNGERLAKLG SSATKEARKK RMARQRRLPS HHYRHHSHQT  480
QHQSQSSDQS LRIVGENCTM SPANNPGNWV YWPSAASSPM IMVPPPEAPQ PHPMTERPGM  540
QPQNHQKHAS ADKRSQSQNW KTEKNLKFLL QKVLKQSDVG NLGRIVLPKK EAESHLPELE  600
SRDGISIAME DIGTSRVWNM KYRFWPNNKS RMYLLENTGD FVRTNGLQEG DFIVLYADTK  660
CGKYLIRGVK VRQTGPKAEG KKPAKKNVRN SSSAIALMKQ LVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-128	B3 family protein

Link Out ? help Back to Top
Ensembl	OIT22032