PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT21743

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 613aa MW: 68835.4 Da PI: 4.5197

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT21743	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.5	1.8e-51	30	156	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 ppGfrFhPtdeelvv+yLk+k+ ++++ l ++i+ +d+yk++P+dLp +k+k+++++w+fFs+rd+ky++g r+nratk+gyWkatgkd+ +++ ++++v OIT21743 30 PPGFRFHPTDEELVVYYLKRKICRRRILL-DAIAVTDVYKWDPEDLPdlSKLKTGDRQWFFFSPRDRKYPNGARSNRATKHGYWKATGKDRIITC-NSRAV 128 9***********************999.89**********96559999*************************************.999 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kktLvfykgrap ge+tdWvmhey++ OIT21743 129 GVKKTLVFYKGRAPVGERTDWVMHEYTM 156 **************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MKLLVDSSTP SSSSACKEIK VFGESTDIFP PGFRFHPTDE ELVVYYLKRK ICRRRILLDA 60 IAVTDVYKWD PEDLPDLSKL KTGDRQWFFF SPRDRKYPNG ARSNRATKHG YWKATGKDRI 120 ITCNSRAVGV KKTLVFYKGR APVGERTDWV MHEYTMDEEE LKRCENAQDY YALYKVFKKS 180 GPGPKNGEQY GAPFREEDWA DDECPVAEVS VQQENSTKHV NEVPAAADHA LEELLKRIAD 240 DEPVLLEPFF VDNDYALDQL VQEEDTESTL LDQSSMEVNL YNHCAVVGPS CQQYNANTSF 300 DLTQSGISQL QLHEAAEVSS APVNPEKALH AVEEDFLEDF LEMDDLLGPQ PSVQNFDDSA 360 LSIQNFDNQT PNGQIFDKPA GNLETVQFDD FDGLGEFDLY HDAHLLLDNE GTTVGQNAEL 420 YMNNFVNGIA YPDSTTYMST FQNDMMNNRQ MHLNHENQIN HQLWRHDESF NVFNPIEGDQ 480 SVVHQVTSGV VYDNNTNHPV GANQNPIAKK DDGAQSWISS NLWAFVDSIP TTPASAAESA 540 LVNRAFERMS SFSRMKLNAR NMNVAAGNTS AASSSSGKSK NGFFCFSLLG VLCAVLWVLI 600 GISDKILGRY ISS

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MKLLVDSSTP SSSSACKEIK VFGESTDIFP PGFRFHPTDE ELVVYYLKRK ICRRRILLDA  60
IAVTDVYKWD PEDLPDLSKL KTGDRQWFFF SPRDRKYPNG ARSNRATKHG YWKATGKDRI  120
ITCNSRAVGV KKTLVFYKGR APVGERTDWV MHEYTMDEEE LKRCENAQDY YALYKVFKKS  180
GPGPKNGEQY GAPFREEDWA DDECPVAEVS VQQENSTKHV NEVPAAADHA LEELLKRIAD  240
DEPVLLEPFF VDNDYALDQL VQEEDTESTL LDQSSMEVNL YNHCAVVGPS CQQYNANTSF  300
DLTQSGISQL QLHEAAEVSS APVNPEKALH AVEEDFLEDF LEMDDLLGPQ PSVQNFDDSA  360
LSIQNFDNQT PNGQIFDKPA GNLETVQFDD FDGLGEFDLY HDAHLLLDNE GTTVGQNAEL  420
YMNNFVNGIA YPDSTTYMST FQNDMMNNRQ MHLNHENQIN HQLWRHDESF NVFNPIEGDQ  480
SVVHQVTSGV VYDNNTNHPV GANQNPIAKK DDGAQSWISS NLWAFVDSIP TTPASAAESA  540
LVNRAFERMS SFSRMKLNAR NMNVAAGNTS AASSSSGKSK NGFFCFSLLG VLCAVLWVLI  600
GISDKILGRY ISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	6e-95	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT21743