PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21601
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 277aa    MW: 31467.3 Da    PI: 6.3988
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21601genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.9e-13105156255
               HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
               +  h e+Er+RR+++ + ++ Lr+llP       ++K s ++   +Av+YI +Lq
  OIT21601 105 KIIHREIERQRRQEMSNLYASLRQLLPLeY---LKGKRSTSDHILEAVNYIEHLQ 156
               5669************************77...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MMDNFHSFFP FQQNEDNDNY QLLYPPTNTN SSSFLYYQED SNQLQDLVTD LTPFHSLEVD  60
TNNVDFNNTN VKTNKINKRG KKSQNSSSGV SLPVDENTTD FKQKKIIHRE IERQRRQEMS  120
NLYASLRQLL PLEYLKGKRS TSDHILEAVN YIEHLQEKVR KMEDNKGKLK MGLSSSDVDY  180
PKSGCSSSSH ESSAAIITVK LCLDGMEILT DCSVTNEGFY LSRVLEVLLR EGLSIVSCSC  240
NKVNGRLLHT IRTEVCSPSS IDAYELQKKL AATINSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.11e-23bHLH family protein