PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21562
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 334aa    MW: 38837 Da    PI: 4.3355
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21562genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.92.3e-24121432128
       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
               p+G rFhPtd e++ +yL   v++++l+ ++  ++ +d+y   ePw++ +   + +++++  yf ++++k+++t kr +r++ +g+Wk + k +ev++ kg
  OIT21562  12 PMGHRFHPTDREVL-KYLIGFVRDEPLHSQNElMPVADLYADkEPWQIFEaydQGNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKPQSKGREVFDDKG 111
               89**********99.9**********77766548999*997559****74232333344467*************************************** PP

       NAM  98 elvglkktLvfy.kgrapkgektdWvmheyrl 128
               +l+g  k+L +   +++++ ++ +W+m ey+l
  OIT21562 112 RLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 143
               ************656888889*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEYSQAKCFS RPMGHRFHPT DREVLKYLIG FVRDEPLHSQ NELMPVADLY ADKEPWQIFE  60
AYDQGNNNNN TRYFITPQKK EKPTWKRVSR TVGKGTWKPQ SKGREVFDDK GRLMGYVKSL  120
KYIPANKSSN NVNGEWLMTE YSLFDRYLAA REIKNKGFVI CKIKKKGKPG DEKKGNNIDE  180
VVNDENMRDI EEFINTVLQE DVQVEDNGIR LNGIAKLDDQ ENNIIQYVEG DQVRDHVLGL  240
LDSPEDIVDV NDHEEYVEDC VDEGDEVQVH LLEEYIDSVL QSEDVQAEDN RMMSSNDIIA  300
KDDQENMEYQ VEDNQHATFW ASAEDIDLDT INFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14000.11e-14NAC family protein