PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AT5G14000.1 | ||||||||
Common Name | anac084, NAC084 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | NAC | ||||||||
Protein Properties | Length: 206aa MW: 23487.7 Da PI: 9.4831 | ||||||||
Description | NAC domain containing protein 84 | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 105.7 | 5.8e-33 | 15 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lp G+rFhPt++el+ +yL +k+ +++l+ ++i+ +d++ ++P ++p +++ek+ yfF+k+++ +++++r + + +gyWk gk++++++ g+ AT5G14000.1 15 LPIGYRFHPTEQELILHYLLPKAFASPLPS-SIIPVFDLFFSHPLSFPG--DQKEKQRYFFCKKREVSSNEHRIKISSGDGYWKPIGKERPIIA-CGK 108 699*************************99.88***************4..4578899************************************.999 PP NAM 99 lvglkktLvfykg..rapkgektdWvmheyrl 128 + g+++tL+fy+ +++ +kt+W m ey l AT5G14000.1 109 TFGIRRTLAFYETnkSSSYCNKTRWSMTEYCL 140 ***********7611445567*********87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.8E-40 | 10 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 36.989 | 15 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.0E-19 | 16 | 140 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0007275 | Biological Process | multicellular organism development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0009005 | anatomy | root | ||||
PO:0009009 | anatomy | plant embryo | ||||
PO:0009031 | anatomy | sepal | ||||
PO:0009046 | anatomy | flower | ||||
PO:0009047 | anatomy | stem | ||||
PO:0009052 | anatomy | flower pedicel | ||||
PO:0025022 | anatomy | collective leaf structure | ||||
PO:0001185 | developmental stage | plant embryo globular stage | ||||
PO:0007611 | developmental stage | petal differentiation and expansion stage | ||||
PO:0007616 | developmental stage | flowering stage |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MEVEKRIVVN GGMKLPIGYR FHPTEQELIL HYLLPKAFAS PLPSSIIPVF DLFFSHPLSF 60 PGDQKEKQRY FFCKKREVSS NEHRIKISSG DGYWKPIGKE RPIIACGKTF GIRRTLAFYE 120 TNKSSSYCNK TRWSMTEYCL AGFASAKVSG EWAVYNVYER KGSKGRKQRK SREGDDEELR 180 CIDHFTVGSN HETGPPPPSP PTSADE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-21 | 13 | 140 | 13 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
At.31991 | 0.0 | flower| leaf| seed |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 30684707 | 0.0 | ||||
Genevisible | 250208_at | 0.0 | ||||
Expression Atlas | AT5G14000 | - | ||||
AtGenExpress | AT5G14000 | - | ||||
ATTED-II | AT5G14000 | - |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AT5G14000.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
T-DNA Express | AT5G14000 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY099635 | 0.0 | AY099635.1 Arabidopsis thaliana unknown protein (At5g14000) mRNA, complete cds. | |||
GenBank | BT006254 | 0.0 | BT006254.1 Arabidopsis thaliana At5g14000 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_568292.1 | 1e-153 | NAC domain containing protein 84 | ||||
TrEMBL | Q9FFX5 | 1e-152 | Q9FFX5_ARATH; At5g14000 | ||||
STRING | AT5G14000.1 | 1e-153 | (Arabidopsis thaliana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7874 | 25 | 41 | Representative plant | OGRP11796 | 5 | 6 |
Link Out ? help Back to Top | |
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Phytozome | AT5G14000.1 |
Entrez Gene | 831248 |
iHOP | AT5G14000 |
wikigenes | AT5G14000 |
Publications ? help Back to Top | |||
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