PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT21230 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 246aa MW: 26977 Da PI: 5.0205 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.5 | 1.6e-18 | 66 | 115 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a+++++g OIT21230 66 VYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALSIKG 115 59****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MAEVEVPCPE TESSTTNSSS SSSSLSSESM HYSVFNSSKE LPEDKKPPTK RKRETINTGN 60 RVQNQVYRGV RMRSWGKWVS EIREPRKKSR IWLGTYPTAE MAARAHDVAA LSIKGKSAIL 120 NFPNLIDSLP RPVSNLPRDV QAAAAKAAAM NLNLTSVSSS SSFSSSTTIT STGSEELGEI 180 IELPSLEESD ETKTELRLSD SVEGWLYSPW WASTDSDFCG YFLEQSASAT GESSIPSSFE 240 ILKWAC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 1e-49 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT21230 |