PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT21182
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 372aa    MW: 41606.3 Da    PI: 5.0494
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT21182genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.94.9e-29145206159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               ldDg++WrKYGqK++ g+++pr+YYrCt +   gC ++k+v+r++edp+++e+tY+g+H+++
  OIT21182 145 LDDGFSWRKYGQKDILGAKYPRGYYRCTLRhvqGCLATKQVQRADEDPTIFEVTYRGRHTCN 206
               59**************************988889**************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MENYGADNNG ELNRIISELT QGRDLVHQLQ LQLNAPYSSS SSSPETTRDF LLHNIQSKFD  60
KALSLLQYST EDTCNSLLPL SNSVPIYNFG RSESPPSFTA SPPHSEDSDR DLEPKDPTTR  120
KRKSSTPRWT KRVQLCPGAP IEGTLDDGFS WRKYGQKDIL GAKYPRGYYR CTLRHVQGCL  180
ATKQVQRADE DPTIFEVTYR GRHTCNQGGG NANNNVMNPA PLTIIPQNQE QNLGAGSRNE  240
HQQIVSVPQQ NPQEILLNFQ RNLNISNDNN FNFNTDPNNV PFSTFASSSD IKSDQDYSFV  300
PNSIIQSDNF VENFSQSYMS AGTSGSSSNY FGMSSNSEMN NFGGKQNGSN DYQFNSMGYE  360
SNFPFDYQGF SS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119124TRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.17e-46WRKY family protein