PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT20164 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 173aa MW: 20269 Da PI: 9.3859 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.1 | 4.7e-29 | 13 | 66 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrW+p+LHe F++ ve+LGG +kAtPk+il+ m++kgL ++hvkSHLQ+YR OIT20164 13 PRLRWSPQLHELFIQSVESLGGRNKATPKRILQKMDIKGLEISHVKSHLQMYRN 66 9****************************************************5 PP | |||||||
2 | Myb_DNA-binding | 47.7 | 3.7e-15 | 14 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rW+++++el+++ v+ lGg+ t+k+I ++m kg+ ++ks++q+y+ OIT20164 14 RLRWSPQLHELFIQSVESLGGRnkaTPKRILQKMDiKGLEISHVKSHLQMYR 65 89************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 173 aa Download sequence |
MRDIRQYKKS LAPRLRWSPQ LHELFIQSVE SLGGRNKATP KRILQKMDIK GLEISHVKSH 60 LQMYRNMKEQ PSLHVVMPYF NLSSTLLVSK RLSSKQKECG SQFCCKERNS SDQNGENIHY 120 NDYQEAEGSI SSGMTKEEEE YCKKERNFWP VDNHKKFHST MENTQINLDL SLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G02060.1 | 6e-25 | G2-like family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT20164 |