PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19565
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family HSF
Protein Properties Length: 334aa    MW: 37089.2 Da    PI: 5.0584
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19565genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind117.11.1e-36251152101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y+++ed+++++++sw+e+g++f+v+++++fa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k+ll++i+
      OIT19565  25 FLTKTYQLVEDPSMDDVVSWNEDGSTFIVWNPTDFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNDCFRRGEKSLLRDIQ 112
                   9*****************************************************************99.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
      OIT19565 113 RRK 115
                   *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MTPPIERNGG ETAAGETARS VPTPFLTKTY QLVEDPSMDD VVSWNEDGST FIVWNPTDFA  60
RDLLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFSNDCF RRGEKSLLRD IQRRKVVTPI  120
ATPCAAATAV VTVAAPPAQP LWTAISSSDS GEEQVVSSNS STGGTTELLG ENERLRKENL  180
QLNKELSQMR SLCGNIYSLM SNYADPSTSG NQSAESISPA VKPLDLLPRK RSVGESDINK  240
AVGDCGKRAE PEDIRARLFG FSIGMKRVRE SDEARAEHDQ ELRLQQPGNG VKSEPLDQEN  300
GGENEERSWL IHCSGRNQRV CNDSEVGVSN FRLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.14e-80HSF family protein