PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT19307

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 408aa MW: 42864.9 Da PI: 6.8062

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT19307	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	65.8	7.7e-21	305	367	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L +eN++L+ e+++++ e++ l +++ OIT19307 305 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLREENSSLRAEVNRIRSEYEHLLAQN 367 89********************************************************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MGSSEMDKSS KEAKEAKEPK TPNSQEQAST TTAGSVNPDW SGFQAYSPMP PHGFMASSPQ 60 AHPYMWGVQQ LMPPYGTPPH PYVAMYPHGG IYAHPSMPPG SYPFSPFAMP SPNGVAEAAV 120 SNHGNVEVDG KSSEGKEKLP IKRSKGSLGS LNMITGKNNG PGKTSGASAN GVYSKSAESG 180 SEGSSEGSDA NSQNESPMNS GGGQDSADTS QNGNAAHGSQ NGGTGGAPHS MINQPMAIAP 240 ISTAGAGGIP GPTTNLNIGM DYWGAATASS IPAIHGNVPS ASVAGGLVAA GSRDSAQSHM 300 WLQDERELKR QRRKQSNRES ARRSRLRKQA ECDELAQRAE VLREENSSLR AEVNRIRSEY 360 EHLLAQNASL KERLGEVPGE DDPKTSRDDQ LLGKKAQHSS QKESEQGS

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MGSSEMDKSS KEAKEAKEPK TPNSQEQAST TTAGSVNPDW SGFQAYSPMP PHGFMASSPQ  60
AHPYMWGVQQ LMPPYGTPPH PYVAMYPHGG IYAHPSMPPG SYPFSPFAMP SPNGVAEAAV  120
SNHGNVEVDG KSSEGKEKLP IKRSKGSLGS LNMITGKNNG PGKTSGASAN GVYSKSAESG  180
SEGSSEGSDA NSQNESPMNS GGGQDSADTS QNGNAAHGSQ NGGTGGAPHS MINQPMAIAP  240
ISTAGAGGIP GPTTNLNIGM DYWGAATASS IPAIHGNVPS ASVAGGLVAA GSRDSAQSHM  300
WLQDERELKR QRRKQSNRES ARRSRLRKQA ECDELAQRAE VLREENSSLR AEVNRIRSEY  360
EHLLAQNASL KERLGEVPGE DDPKTSRDDQ LLGKKAQHSS QKESEQGS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	322	328	RRSRLRK
2	322	329	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-140	bZIP family protein

Link Out ? help Back to Top
Ensembl	OIT19307