PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19199
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 335aa    MW: 37526.6 Da    PI: 9.9263
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19199genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.12.7e-31264321359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ ++p+++++tYegeHnh+
  OIT19199 264 DDYSWRKYGQKPIKGSPHPRAYYKCSSVrGCPARKHVERALDEPTMLTVTYEGEHNHS 321
               99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAVELMMDYR NTSRNNFTIF NTKLEEKAVV QEAASGLESV EKLLKLLSQT QSQSQQQQKQ  60
GNLSSFLKQE NSPMEIEMVA DAAVTKFKNV ISLLGRTRTG HARFRRAPIT SPPKVNKDFI  120
DSKVYCPTPI QQVPPVAYEL YNHQFFQNPR DGVVEKQELV TKKSINFSYA QDICRSNSFN  180
MSTLTGETES SSFKISNLSS AGKPPLSTSS SFKRKCCSSE NGLSGKCSGS SGRCHCSKRS  240
RKLRLKRVER VPAISMKMSD IPPDDYSWRK YGQKPIKGSP HPRAYYKCSS VRGCPARKHV  300
ERALDEPTML TVTYEGEHNH SLSVAETSSL ILESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.14e-71WRKY family protein