PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT19118 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ARF | ||||||||
Protein Properties | Length: 356aa MW: 38996.1 Da PI: 6.6601 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 76.3 | 3.3e-24 | 118 | 220 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+k+ltpsd+++ g +++p+ +a+++ +++ + l+++d +g +We+++iyr++++r++lt+GW++Fv++++L +gD+ vF ++ +++el+v OIT19118 118 FVKILTPSDANNGGGFSVPRFCADSIfprlnfvAEPPVQ--NLSIRDIHGCVWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSAVFARKT-NTGELYV 215 89*********************999*****98666667..6************************************************544.9999*** PP EEE-S CS B3 95 kvfrk 99 +v+r+ OIT19118 216 GVRRA 220 ***97 PP | |||||||
2 | Auxin_resp | 85.4 | 1.2e-28 | 264 | 347 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+ +++Fev +Pra++++Fvv++e ve++ +v ++vGmR+kma+etedss++ + +Gtv++v+ ++ W++S+Wr+L+ OIT19118 264 AAEMAARGMAFEVSCYPRAGWADFVVRAEAVEASSTVFWTVGMRVKMAVETEDSSRTACfQGTVSSVNLPQSGPWRGSPWRMLQ 347 6889999***************************************************99**********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence |
MPPSTTAVPA VSNDVDPTVW KAIAGNSVEI PTVGTRVYYF PQGHAEHANC GSPIFLSSLI 60 PPFILCRVLS VRFLADSVTD EAYAKIFLLP INQSEDNNNV AVNMNGDVED AENEVVSFVK 120 ILTPSDANNG GGFSVPRFCA DSIFPRLNFV AEPPVQNLSI RDIHGCVWEF RHIYRGTPRR 180 HLLTTGWSKF VNSKKLVAGD SAVFARKTNT GELYVGVRRA TRGNDICERW NSTVLRSTEQ 240 TSSGGEVRWR TGQGRVATEA IVEAAEMAAR GMAFEVSCYP RAGWADFVVR AEAVEASSTV 300 FWTVGMRVKM AVETEDSSRT ACFQGTVSSV NLPQSGPWRG SPWRMLQVSY DSVAIC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77850.1 | 1e-127 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT19118 |