PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT08812 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 178aa MW: 20648.8 Da PI: 10.3829 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 61.4 | 2.9e-19 | 13 | 140 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +G+rF t+ el+ ++Lk+ ++g+ l+ e ++ +diy Pw++ + ++ eek y F++ +k++++ +r +r+ ++g+Wk + ++++ kg++v OIT08812 13 MGVRFPRTEAELI-NFLKRFLKGELLPSECPnFQLADIYGDqPPWQIFGASDHpEEKVRYIFTRLKKQKSEHTRVRRTCANGTWKGQTGIFPIKNGKGTVV 112 7************.9*********977755459999***87368***743333255566**************************88888*****9***** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g ++ + f + +++ ++ dW+m+ey++ OIT08812 113 GFRRRFKFQTSSKEGEHNKDWLMKEYSV 140 *********998888899********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MSMVPAARRG CIMGVRFPRT EAELINFLKR FLKGELLPSE CPNFQLADIY GDQPPWQIFG 60 ASDHPEEKVR YIFTRLKKQK SEHTRVRRTC ANGTWKGQTG IFPIKNGKGT VVGFRRRFKF 120 QTSSKEGEHN KDWLMKEYSV GDDFFKENNI PKEDIVVCRI KKNIRAEKNH GVLTTLEI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 7e-12 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT08812 |