PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT08221 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 125aa MW: 14440.2 Da PI: 9.0992 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.8 | 2e-16 | 71 | 122 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrdp r +r +l ++ +e+Aa a+++ + kl+g+ OIT08221 71 RYRGVRRRP-WGKFAAEIRDPI----RkgARLWLRTYEMPEDAALAYDRSAYKLRGA 122 7********.**********72....235**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence |
MQPGISSEIF DLSNIICYDS MEHDFSENSS FSEIFSEISN QKGDTTPTSL QTCNNLGSKE 60 RGVHAPTNWR RYRGVRRRPW GKFAAEIRDP IRKGARLWLR TYEMPEDAAL AYDRSAYKLR 120 GARPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 2e-20 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT08221 |