PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08159
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 302aa    MW: 32189.3 Da    PI: 5.9703
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08159genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.41.4e-09151195554
               HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
       HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
               h+++Er RR+ri +++  L+el+P+ +      K + a +L + v+Y+k L
  OIT08159 151 HSIAERLRRERIAERIRALQELVPSvN------KTDRAVMLDEIVDYVKFL 195
               99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MANNPSEGPD DFFDQILGFP AYNGAETNLA GNDAGAIPPA MMLQLNSGDA SGQFSGMGLG  60
VGLGGGGGFH HPSQSGSFPL GLSLEGGKSG FMKMDDVSAV PGRRFRDDVV DSRASSSVKP  120
GFHGQPMPSM PHPPAIRPRV RARRGQATDP HSIAERLRRE RIAERIRALQ ELVPSVNKTD  180
RAVMLDEIVD YVKFLRLQVK VLSMSRLGGA GAVAPLVTDI PISSVEEESS EGGNNQPAWE  240
KWSSDGTERQ VAKLMEENVG SAMQFLQSKA LCIMPISLAS AIYHSQPPDT SSLIKPETNP  300
PS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156161RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.25e-84bHLH family protein