PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT08023 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 24001.7 Da PI: 5.0836 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.1 | 4.4e-18 | 23 | 73 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f +e+Aa+a++ a+++++g OIT08023 23 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPNPEMAARAHDVAALSIKG 73 68*****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 216 aa Download sequence |
MDKTQDLEGN KKIKRNRDSS KHPVYRGVRM RNWGKWVSEI REPRKKSRIW LGTFPNPEMA 60 ARAHDVAALS IKGNSAILNF PQLAASLPRP VTLSPRDIQA AAAKAAAMDT FDNNNINITT 120 SSSEDDDSLP NNSTSTSANM STSSSLSSLV SAIDLATSEE LTQIIELPRL GTSYSDDELK 180 NDFVYYDHSA MEGWLYPDDG GMIYSSCFEP SLLWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11590.1 | 2e-60 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT08023 |