PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07901
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 376aa    MW: 40449.1 Da    PI: 7.2334
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07901genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.61.4e-13119163347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+r + + Rt+ q+ s+ qky
         OIT07901 119 PWTEEEHRLFLLGLQKLGKGDWRGISRNFVTSRTPTQVASHAQKY 163
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MTRRCSHCNN NGHNSRTCPT TRGGTPTGGV GSSSGGGGGV SGGVRLFGVR LTDGSIMKKS  60
ASMGNLSSLH SYHSSSSPNP PGSPSSDVPH LPDGYLSDDP NTHASISANR RLERKKGVPW  120
TEEEHRLFLL GLQKLGKGDW RGISRNFVTS RTPTQVASHA QKYFIRQSNA TRRKRRSSLF  180
DIVADTGTDA SHPLSEEQFM LPPRAIESDK EHLAPSATKA IETDFADTLP SLDLSLKSDF  240
ESMETTPSEP VEETKPNTTT NEIPSVYPAF FPAYIPVPYS FWPSNAVPVP EDRGAEPSHH  300
QILKPIPTIP KEPVNVDELV GMSQLTLADA GSGHIEPSPL SLKLTAEPSR QSAFHASTPV  360
KTAEITKGET APIQAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.11e-74MYB_related family protein