PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07361
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 362aa    MW: 39863.8 Da    PI: 6.419
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07361genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.63.9e-31179237259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+ver+++dp+++++tY++eHnh+
  OIT07361 179 SDMWSWRKYGQKPIKGSPYPRGYYRCSTSkGCLARKQVERNRSDPNMFIVTYTSEHNHP 237
               79************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MEDDWDLHAV VRGCAASSTA ATTTTTTSSA ATTTTTTFCS FQPRQGGNFF SFQDPFVPRF  60
DNPNNTAFEE LHNLYKPFFP KSQPQHQPPL SPQNIPISPL SVLGGLQDLS PQQTLIKQQQ  120
QQHIHQLNTR VLTQPKQSLS VNGSTNSLTS VSHTQSPRPK RRKNQLKKVC QVPAEGLSSD  180
MWSWRKYGQK PIKGSPYPRG YYRCSTSKGC LARKQVERNR SDPNMFIVTY TSEHNHPMPT  240
HRNSLAGSTR QKPVNSEAGT PSDSNKPTSS SPVSSPACNS PATEKQESSR EEKEDIFEDD  300
DDEFGSSNIG LDNMEPADDD FFEGLEELAA NATGDCFPDN FPGSVQFPWL TNNATTTAAG  360
GV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.18e-67WRKY family protein