PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT07090 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | SRS | ||||||||
Protein Properties | Length: 204aa MW: 22965.6 Da PI: 8.7384 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 177.8 | 5.1e-55 | 9 | 148 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelets 103 s +++CqdCGnqakkdC++ RCRtCC+srgf+C+th+kstW p++ rr r+++l++++ ++ +++ +a ++ +++ +++e + e OIT07090 9 SSSSRCQDCGNQAKKDCTYLRCRTCCRSRGFHCQTHIKSTWAPVSTRRPRHHHLHQQQLSTIQQQLQAGPNPNKR------------YRENHEIQGDQEGG 97 56789*********************************************9998887666655443333333332............22334444456778 PP DUF702 104 slPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++P evs +avfrc+rvss+d+ +++aYqt+v+igGhvfkGiLydqG+e+ OIT07090 98 DFPGEVSFPAVFRCIRVSSIDNVVDQYAYQTSVKIGGHVFKGILYDQGPEN 148 9************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MMREVEGSSS SSRCQDCGNQ AKKDCTYLRC RTCCRSRGFH CQTHIKSTWA PVSTRRPRHH 60 HLHQQQLSTI QQQLQAGPNP NKRYRENHEI QGDQEGGDFP GEVSFPAVFR CIRVSSIDNV 120 VDQYAYQTSV KIGGHVFKGI LYDQGPENRY NNNMAAGESS SFQQQQPPNL LTAATISTTT 180 APSYPNLFTA FMPGTQFIQY PKSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75520.1 | 5e-47 | SRS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT07090 |