PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07065
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BBR-BPC
Protein Properties Length: 313aa    MW: 35169 Da    PI: 9.9356
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07065genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind314.63.2e-963431316301
  GAGA_bind  16 paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtksidslqqls 115
                +++++   +++++  + aerda+++er+ a++ek+ ++ erd a +qrd+a+aer+ a+ erdn+++al ++e +++ +l  g+   +gtk  ++++++ 
   OIT07065  34 DQEAFV--MNTKIRMLCAERDAAVEERDRAVIEKNTVLTERDLAIQQRDTAIAERDTAIKERDNAIAALHFQESTMNGTL--GC-RTRGTKRPNQTKNHC 128
                335565..7888888899*****************************************************999866544..33.457777777666633 PP

  GAGA_bind 116 epqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidl.vlngvslDestlPvPvCs 214
                  + +ds    r+   ++a+pi+   +e+ ++ ++k+++ + k  ++k+ k  +k++k +++ +++ + + skae++ +dl ++n++++Des++P+PvC+
   OIT07065 129 -DNSTDSVCINRDVPLTDAFPISAISSEVAKALQVKRTKGN-KGMSRKSVKSPRKTKKVNEDLNRHLTTDGSKAEWDAQDLgSINQIKFDESSMPIPVCT 226
                .4555555556888899999999888888887777744433.333444444334455666666666666789*********88***************** PP

  GAGA_bind 215 CtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                CtG++rqCYkWG+GGWqS+CCtt +S yPLP+ +++r+aRi+grKmS+++f++lL +Laa G+dls p+DLk++WAkHGtn+++ti+
   OIT07065 227 CTGIPRQCYKWGSGGWQSSCCTTYLSEYPLPQLPNKRHARIGGRKMSGSVFSRLLTRLAAVGHDLSMPIDLKTYWAKHGTNRYITIK 313
                **************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MDDGGRRESR RHRMDCSKGG HAPWNVVPPY QMKDQEAFVM NTKIRMLCAE RDAAVEERDR  60
AVIEKNTVLT ERDLAIQQRD TAIAERDTAI KERDNAIAAL HFQESTMNGT LGCRTRGTKR  120
PNQTKNHCDN STDSVCINRD VPLTDAFPIS AISSEVAKAL QVKRTKGNKG MSRKSVKSPR  180
KTKKVNEDLN RHLTTDGSKA EWDAQDLGSI NQIKFDESSM PIPVCTCTGI PRQCYKWGSG  240
GWQSSCCTTY LSEYPLPQLP NKRHARIGGR KMSGSVFSRL LTRLAAVGHD LSMPIDLKTY  300
WAKHGTNRYI TIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-109BBR-BPC family protein