PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06319
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 313aa    MW: 35576.3 Da    PI: 9.334
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06319genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.61.2e-12147191347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+ E++l++ + +++G+g+Wk+I+r+    +t+ q+ s+ qky
         OIT06319 147 PWTEGEHQLFLMGLNRFGKGDWKSISRYYVVSKTPTQVASHAQKY 191
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEWPEFLERS NSQESTFGLF SATPQANEVV ARADQWTPEE KQVFENALSV FNNPISPPFF  60
DYVASKLPHK PLEEIKKYYL ALFKDVEMEN PEPKNKAPAT DGYALEHDQQ NNYQVPQDDD  120
HSDMEAAQNG TPPPVENNRP RRRRGIPWTE GEHQLFLMGL NRFGKGDWKS ISRYYVVSKT  180
PTQVASHAQK YFGRRNSATP TERRRPSIND IQTVTLNPRA TTVTAQINNG RLAYNNNNQG  240
ASLPMHYPYN FGGAMFGHNS HGNFGSFVNR GEASGSSSFN MQQNNNNNLR RPVSPRPFLS  300
MYLSSATRNN NRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.16e-32MYB family protein