PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05532
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BBR-BPC
Protein Properties Length: 282aa    MW: 31248.8 Da    PI: 10.1223
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05532genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind347.33.5e-10612821301
  GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki...rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllalllv 87 
                mdddg + rn+gyyep+  lk +lglqlmss+ +rd+k+   r +n  + + ++ +++rd          +++  rd+++++        ++k+l++ + 
   OIT05532   1 MDDDGLNMRNWGYYEPS--LKGHLGLQLMSSVVDRDTKPfltRRENPIMLGANGMYHSRDsivpeaplshIDY-VRDSWINH--------RDKFLHMFPG 89 
                9*****99*******99..**********************9777888*******************999999.99****99........7899999993 PP

  GAGA_bind  88 enslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpiee.aaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader 186
                         ++++vl++t+  +s+q++++p+++++              ++  ++++++e+  +k++  +++pk++kakk kk s+ +k++ ++    +r
   OIT05532  90 --------NPYTTVLPETSASHSMQMVQQPDVTEDVR------------VNAeEPSVKNESGPSKRKTGGATPKAPKAKKLKKGSSGPKENGTPRV--QR 167
                ........357899************66665555433............33303445556666666677899***********9988877776666..79 PP

  GAGA_bind 187 skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLk 286
                +k  kks+d+v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy+++np+DL+
   OIT05532 168 AKPAKKSMDIVINGIDMDISGIPIPVCSCTGAPQQCYRWGCGGWQSACCTTSISMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYSFANPIDLR 267
                **************************************************************************************************** PP

  GAGA_bind 287 dhWAkHGtnkfvtir 301
                +hWAkHGtnkfvtir
   OIT05532 268 THWAKHGTNKFVTIR 282
                **************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDDDGLNMRN WGYYEPSLKG HLGLQLMSSV VDRDTKPFLT RRENPIMLGA NGMYHSRDSI  60
VPEAPLSHID YVRDSWINHR DKFLHMFPGN PYTTVLPETS ASHSMQMVQQ PDVTEDVRVN  120
AEEPSVKNES GPSKRKTGGA TPKAPKAKKL KKGSSGPKEN GTPRVQRAKP AKKSMDIVIN  180
GIDMDISGIP IPVCSCTGAP QQCYRWGCGG WQSACCTTSI SMYPLPMSTK RRGARIAGRK  240
MSQGAFKKVL EKLAAEGYSF ANPIDLRTHW AKHGTNKFVT IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-105BBR-BPC family protein