PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT05380

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 430aa MW: 48780.5 Da PI: 4.8074

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT05380	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	67.6	3.5e-21	14	143	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgel 99 G+rF+Ptdeel +L k v+ k++++ ++i+ ++y +Pwd+ +++ ++++++ yfF+k ++++a g+r +r + g Wk k+k+v++ +++l OIT05380 14 LGIRFRPTDEELT-LFLLKFVSCKNFSC-DHIRVENLYGNkKPWDIFeNNFLGDDTKVnYFFTKLKRTKAGGSRFSRrLIGGGCWKGLDKHKSVFK-GSKL 111 59********9.89999*****.88999999965496455555555545***********9997999**********9.9* PP NAM 100 vglkktLvfykgrap..kge.ktdWvmheyrl 128 +g kk++ + +++++ +g + W m+ey+l OIT05380 112 IGFKKSFRYLEKEKSvdQGIkNIVWNMKEYSL 143 ********65443114432678****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MTISSHNYGP NPVLGIRFRP TDEELTLFLL KFVSCKNFSC DHIRVENLYG NKKPWDIFEN 60 NFLGDDTKVN YFFTKLKRTK AGGSRFSRRL IGGGCWKGLD KHKSVFKGSK LIGFKKSFRY 120 LEKEKSVDQG IKNIVWNMKE YSLNDNILKV LRQRNIIQHE DYVLCCIKRK SVYANDHKEL 180 GDHMEIAASG NNVVAVMNST TQEHELDYIT SSSEDQGTGF HDLCPSNQFA SSEHNNAFDQ 240 LQLVDVQAQN IEEMAPYSVQ SHVEYVGSSW TTSNQFTYYS PDNNGFQLQQ DHSNVPSTLA 300 DINIDHVDMK VYEYMGSLLA EKSNTAEPHL PICNIDEQNI MCPMAQGSSS AMVNEENINA 360 GFVSDQWSKE QVHNIEERAP ISFTDMLTSS DYYAEPCLVI SSDECFTMEE LLGSDNDDVI 420 AADLGWMATQ

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MTISSHNYGP NPVLGIRFRP TDEELTLFLL KFVSCKNFSC DHIRVENLYG NKKPWDIFEN  60
NFLGDDTKVN YFFTKLKRTK AGGSRFSRRL IGGGCWKGLD KHKSVFKGSK LIGFKKSFRY  120
LEKEKSVDQG IKNIVWNMKE YSLNDNILKV LRQRNIIQHE DYVLCCIKRK SVYANDHKEL  180
GDHMEIAASG NNVVAVMNST TQEHELDYIT SSSEDQGTGF HDLCPSNQFA SSEHNNAFDQ  240
LQLVDVQAQN IEEMAPYSVQ SHVEYVGSSW TTSNQFTYYS PDNNGFQLQQ DHSNVPSTLA  300
DINIDHVDMK VYEYMGSLLA EKSNTAEPHL PICNIDEQNI MCPMAQGSSS AMVNEENINA  360
GFVSDQWSKE QVHNIEERAP ISFTDMLTSS DYYAEPCLVI SSDECFTMEE LLGSDNDDVI  420
AADLGWMATQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	5e-18	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT05380