PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05036
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 339aa    MW: 37610 Da    PI: 8.3702
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05036genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.63e-29161220159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               ++Dg++WrKYGqK+ ++++ pr+Y++C++a +C vkkkv+rs ed+++++ tYegeHnh+
  OIT05036 161 VKDGFQWRKYGQKVTRDNPSPRAYFKCSFApNCLVKKKVQRSVEDQSILVATYEGEHNHS 220
               58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MEFTSLVDTS LDLNFRPLRV PDGVPKQEVE SNFIGLGIDH TPVKDEASDL LEELNRVSAE  60
NKKLTEMLTV MCQNYNALRN QVTEYMSKHN STTTTTSADD HSAGSKKRKS ENNEILKSIQ  120
GESSSSDEDN SCTKKPREEH IKTKTTRVYV RTEPSDTSLI VKDGFQWRKY GQKVTRDNPS  180
PRAYFKCSFA PNCLVKKKVQ RSVEDQSILV ATYEGEHNHS HPSKMDAVTT SPCSRLNGKS  240
TLGVTASVPC HTLNSTEPKN MLQIEDKKVA SSTSTSTAGG HKRKLLSGGA DNNNHQNRPE  300
FQHFLIEQMA TSLTKDPSFQ AALAAAISGK FLPNNQTDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.13e-91WRKY family protein