PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT04515 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 247aa MW: 29097.4 Da PI: 7.4052 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.4 | 3.4e-18 | 4 | 49 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed++l ++v+++G+++W++Ia++++ gR++k+c++rw++ OIT04515 4 RGHWRPHEDQKLRELVEKYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 59.7 | 6.2e-19 | 56 | 99 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++T+eE+e+l+ a++ +G++ W+ Iar ++ gRt++ +k++w+ OIT04515 56 RNPFTEEEEERLLSAHRIHGNR-WAIIARLFP-GRTDNAVKNHWHV 99 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MCSRGHWRPH EDQKLRELVE KYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRNPFT 60 EEEEERLLSA HRIHGNRWAI IARLFPGRTD NAVKNHWHVI MARKCRERSK IYARRAIAAA 120 TTAAHKKSTS NEQESSSSRQ QDNYMQMSNE IMITRCFNSL TYNYSFYPKL LHNDYLFHHA 180 KMDQVLCTDE NQPTEFYDFL QVNTESNKSE VIDHASRIRD DEEVEQEAVD LHQNAQFIDF 240 LSVGDSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 1e-79 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT04515 |