PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT04174

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 440aa MW: 47366 Da PI: 9.8659

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT04174	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.4	4.2e-15	362	412	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ ee+ ++ OIT04174 362 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEMLEM 412 79***************************************9888776555 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MGSNFNFKNF GNEPPGEGGS GVGGKQPGNF QLPRQPSIYS LTFDEFLSTT GGSGKDFGSM 60 NMDELLKNIW NAEESQTMGG SGINGQEVGS VQGGNLQRQG SLTLPRTLSH KTVDEVWRDM 120 SKEYGGGKDG NSVGVPANMP QRQQTLGEIT LEEFLVRAGV VREDAQLAAK SNNVGGIFAD 180 LSYAGNNTGL GFGYQQANRN TGETGIQAAN LPLNVNGVRS TQQQLRAQQL QQQQQQQPQP 240 QQQQPQQQPL FPKQPALAYA APMAIPNNGQ LGSPGMRAGM VGISDPAINS NFIQGAALTG 300 GGMGMVGLGA GGVTVATASP AVSSDGLGKS SGDTPSVSPL PYVFNGGIRG RKYSTVEKVV 360 ERRQRRMIKN RESAARSRAR KQAYTMELEA EVAKLKEENE ELQKKQEEML EMQKNQVMEM 420 INLQRGAKRR CLRRTQTGPW

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MGSNFNFKNF GNEPPGEGGS GVGGKQPGNF QLPRQPSIYS LTFDEFLSTT GGSGKDFGSM  60
NMDELLKNIW NAEESQTMGG SGINGQEVGS VQGGNLQRQG SLTLPRTLSH KTVDEVWRDM  120
SKEYGGGKDG NSVGVPANMP QRQQTLGEIT LEEFLVRAGV VREDAQLAAK SNNVGGIFAD  180
LSYAGNNTGL GFGYQQANRN TGETGIQAAN LPLNVNGVRS TQQQLRAQQL QQQQQQQPQP  240
QQQQPQQQPL FPKQPALAYA APMAIPNNGQ LGSPGMRAGM VGISDPAINS NFIQGAALTG  300
GGMGMVGLGA GGVTVATASP AVSSDGLGKS SGDTPSVSPL PYVFNGGIRG RKYSTVEKVV  360
ERRQRRMIKN RESAARSRAR KQAYTMELEA EVAKLKEENE ELQKKQEEML EMQKNQVMEM  420
INLQRGAKRR CLRRTQTGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-91	bZIP family protein

Link Out ? help Back to Top
Ensembl	OIT04174