PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT03133

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 376aa MW: 42271.9 Da PI: 7.8781

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT03133	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4.2e-32	200	253	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ OIT03133 200 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 253 9****************************************************7 PP
2	Myb_DNA-binding	48.9	1.5e-15	201	252	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ OIT03133 201 RMRWTTSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 252 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MPLEGVFVQT PSSSNPIPDL SLHISPPNSS SSPSSKPTNC LTELSLAHPT AINEEKNLFN 60 SENRSFPRNP LPHQSQNNYL LQPNNQMNNI NHGVSLLDVS SESTLMRPIK GIPIYHQNYS 120 FPNFLEKDPK RFGSLFSPYN FNGGSDHLSN AYRIPMANRL HHHHSQYGVG LGHSNETNSH 180 SFMRSRFLPK FPGKRSMRAP RMRWTTSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT 240 LAHVKSHLQM YRTVKTTDKP AASSGQSDGS SEEDLLKIDR ILDQRGPSDG FDDPSTTTPT 300 LWSNSSSSRE RWSQANFSDS NGVRSTSFPS QQRSGHHIEE CEYSRPVSYV GCSLDQRNPS 360 LEFTLGRPDW VEKEHD

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MPLEGVFVQT PSSSNPIPDL SLHISPPNSS SSPSSKPTNC LTELSLAHPT AINEEKNLFN  60
SENRSFPRNP LPHQSQNNYL LQPNNQMNNI NHGVSLLDVS SESTLMRPIK GIPIYHQNYS  120
FPNFLEKDPK RFGSLFSPYN FNGGSDHLSN AYRIPMANRL HHHHSQYGVG LGHSNETNSH  180
SFMRSRFLPK FPGKRSMRAP RMRWTTSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT  240
LAHVKSHLQM YRTVKTTDKP AASSGQSDGS SEEDLLKIDR ILDQRGPSDG FDDPSTTTPT  300
LWSNSSSSRE RWSQANFSDS NGVRSTSFPS QQRSGHHIEE CEYSRPVSYV GCSLDQRNPS  360
LEFTLGRPDW VEKEHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	8e-61	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT03133