PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT02782 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NF-YA | ||||||||
Protein Properties | Length: 126aa MW: 14019.7 Da PI: 5.1226 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 45.2 | 3e-14 | 18 | 52 | 1 | 36 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36 dep++VNaKQyq+ ++RR+ Rakle+++kl +k+rk OIT02782 18 DEPIFVNAKQYQATVRRREYRAKLEAQNKL-SKGRK 52 79****************************.89887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MLGPISARVP LPLDYQQDEP IFVNAKQYQA TVRRREYRAK LEAQNKLSKG RKVRVPNVSA 60 WLEDLVESGS PDVTNVQGTP VSDALQLNRQ IMESQSYSTP TCSGISNGSN CDDMDQQQPL 120 NYSAFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54160.1 | 2e-20 | NF-YA family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT02782 |