PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT02538

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 279aa MW: 31271.2 Da PI: 9.3654

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT02538	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.6	5.7e-33	26	80	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH++Fv+av++LGG+ekAtPk++l+lm+vkgLtl+h+kSHLQkYRl OIT02538 26 KPRLRWTVDLHQHFVDAVTKLGGPEKATPKSVLRLMGVKGLTLYHLKSHLQKYRL 80 79****************************************************8 PP
2	Myb_DNA-binding	64	3e-20	28	79	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++++ +vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ OIT02538 28 RLRWTVDLHQHFVDAVTKLGGPekaTPKSVLRLMGvKGLTLYHLKSHLQKYR 79 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MYNGSGAGRG GSFMYENEVV MTRDPKPRLR WTVDLHQHFV DAVTKLGGPE KATPKSVLRL 60 MGVKGLTLYH LKSHLQKYRL GQQAKKQNAA EQNKENSGDS SGQFNLHSSG PGTSSLSMNY 120 IQGDVPIADA VMSLQKRLQD QLEVQQKLQM RIEAQGKYLQ AILSKAQKSI AVNMNSPSAV 180 EATRAQLTDF DLPLSNLMDY TNREKRDDNI IDKRTHDNIN EELQRSNYIV EEEQKSNMNL 240 KLKEASINFD LNSRSSYDFV GANAAVLEAK SLLHGRLET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	4e-64	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT02538