PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT01746

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 638aa MW: 71994 Da PI: 6.6092

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT01746	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.1	7.1e-09	391	428	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + OIT01746 391 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 428 554459******************************88 PP
2	BELL	113.9	8.6e-37	254	322	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk+k+kLl++leeVd+rYk+y++q+++v+s Feavag g+a++Y +lA+ka+SrhFrcL+d i++qi OIT01746 254 ELQKRKSKLLQMLEEVDRRYKHYCDQMKAVVSTFEAVAGNGAARVYSTLASKAMSRHFRCLRDGIVGQI 322 89*****************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MAGQESEEIK PRSMVTTTGY WYSDHTSTPS NNIPNLVNHQ LQSFETNPEI YNLTSGMEMI 60 GFPSNNPQVM WKGNFFNKNS GNSSVGPSSS NSKSTNEQFY QHGNFTTSEN MLVSPTEDQG 120 WNENNRLLVD DPSLRCVFPC EGNERPSQGL SLSLCSSNPS SIGLQSFELR HQQQILQDGF 180 LGKAAANIQG YYHQIKDSKY LGPAQELLVE FCSLGTKQND HSTKVLKQQK SNQWEDENAS 240 SSKKQTLQSL DLLELQKRKS KLLQMLEEVD RRYKHYCDQM KAVVSTFEAV AGNGAARVYS 300 TLASKAMSRH FRCLRDGIVG QIKATKKAMG EKDSVIVPGT TRGETPRLRL LDQTLRQQKA 360 FQQMNMMETH PWRPQRGLPE RSVSVLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN 420 WFINARVRLW KPMVEEMYLE ETKDQQENLE SPEGSKGLDH DMNGISVARQ INQNPHHLHI 480 EDQKPNLVRI DSEYISSIIN HPEKNDTNNN NKNCLQDQHQ VHNLHSFGRG GDHSFGAIEL 540 DFSSYNHNST GAIAYGNENV QHNIGGGVSL TLGLNQNDGS GMGLSTFSQA SQSSLFYPRD 600 DHIDQDCQQV QYSLLDSENQ NLPYRNLMGA QLLHDLAG

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MAGQESEEIK PRSMVTTTGY WYSDHTSTPS NNIPNLVNHQ LQSFETNPEI YNLTSGMEMI  60
GFPSNNPQVM WKGNFFNKNS GNSSVGPSSS NSKSTNEQFY QHGNFTTSEN MLVSPTEDQG  120
WNENNRLLVD DPSLRCVFPC EGNERPSQGL SLSLCSSNPS SIGLQSFELR HQQQILQDGF  180
LGKAAANIQG YYHQIKDSKY LGPAQELLVE FCSLGTKQND HSTKVLKQQK SNQWEDENAS  240
SSKKQTLQSL DLLELQKRKS KLLQMLEEVD RRYKHYCDQM KAVVSTFEAV AGNGAARVYS  300
TLASKAMSRH FRCLRDGIVG QIKATKKAMG EKDSVIVPGT TRGETPRLRL LDQTLRQQKA  360
FQQMNMMETH PWRPQRGLPE RSVSVLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN  420
WFINARVRLW KPMVEEMYLE ETKDQQENLE SPEGSKGLDH DMNGISVARQ INQNPHHLHI  480
EDQKPNLVRI DSEYISSIIN HPEKNDTNNN NKNCLQDQHQ VHNLHSFGRG GDHSFGAIEL  540
DFSSYNHNST GAIAYGNENV QHNIGGGVSL TLGLNQNDGS GMGLSTFSQA SQSSLFYPRD  600
DHIDQDCQQV QYSLLDSENQ NLPYRNLMGA QLLHDLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-126	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT01746